BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007E03SP1|AL425703
(773 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig439 1229 0.0
>3x_Contig439
Length = 1488
Score = 1229 bits (611), Expect = 0.0
Identities = 619/621 (99%), Gaps = 1/621 (0%)
Strand = Plus / Plus
Query: 153 attcmagcaagggcagaagtatccaccgaactcgatgaattacactccgttagatcagaa 212
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 attccagcaagggcagaagtatccaccgaactcgatgaattacactccgttagatcagaa 233
Query: 213 tcacatgcaacatcagcatgctacagtgctatgttgcagttgtggtgtgcctatggatgg 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tcacatgcaacatcagcatgctacagtgctatgttgcagttgtggtgtgcctatggatgg 293
Query: 273 gtcctcagggctagttatgtgttacgactgtattaagttgaatgtcgatattacagaagg 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gtcctcagggctagttatgtgttacgactgtattaagttgaatgtcgatattacagaagg 353
Query: 333 tattcccagagaggctaatgtttctttctgtagaaactgtgagaggttcttgcaaccacc 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tattcccagagaggctaatgtttctttctgtagaaactgtgagaggttcttgcaaccacc 413
Query: 393 aagccaatggattagggcttctttggaatctcgtgaacttttggcgttgtgtttacgtcg 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 aagccaatggattagggcttctttggaatctcgtgaacttttggcgttgtgtttacgtcg 473
Query: 453 tttgaaaggcttaaacaaagttcgattagtggatgcatcatttatctggaccgaacctca 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tttgaaaggcttaaacaaagttcgattagtggatgcatcatttatctggaccgaacctca 533
Query: 513 ttctagacgtatccgggtcaaattgaccgttcaaggtgaagctatggctaacactattat 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ttctagacgtatccgggtcaaattgaccgttcaaggtgaagctatggctaacactattat 593
Query: 573 ccagcaaacatttgaagtggaatatgtggtgattgccatgcaatgtccggactgtgctag 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ccagcaaacatttgaagtggaatatgtggtgattgccatgcaatgtccggactgtgctag 653
Query: 633 atcttataccactaatacatggagagcaaacgtccaaattagacaaaaagttcctcataa 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 atcttataccactaatacatggagagcaaacgtccaaattagacaaaaagttcctcataa 713
Query: 693 gagaactttcttgtatttagaacagttgattttgaagcacaatgcccatgtttgacacca 752
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 714 gagaactttcttgtatttagaacagttgattttgaagcacaatgcccatg-ttgacacca 772
Query: 753 tttccattagtgaggcaaagg 773
|||||||||||||||||||||
Sbjct: 773 tttccattagtgaggcaaagg 793
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.714 1.32
Gapped
Lambda K H
1.39 0.714 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4621
Number of Sequences: 1807
Number of extensions: 4621
Number of successful extensions: 162
Number of sequences better than 1.0e-20: 1
length of query: 773
length of database: 10,358,551
effective HSP length: 16
effective length of query: 757
effective length of database: 10,329,639
effective search space: 7819536723
effective search space used: 7819536723
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.2 bits)
S1: 12 (24.6 bits)
S2: 50 (101.1 bits)